Statistical Methods for Microbiome Compositional Data

A suite of methods for powerful and robust microbiome data analysis addressing zero-inflation, phylogenetic structure and compositional effects (Zhou et al. (2021)). The methods can be applied to the analysis of other (high-dimensional) compositional data arising from sequencing experiments.


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install.packages("MicrobiomeStat")

1.0 by Jun Chen, 16 days ago


Browse source code at https://github.com/cran/MicrobiomeStat


Authors: Xianyang Zhang [aut] , Jun Chen [aut, cre] , Huijuan Zhou [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports ggplot2, matrixStats, Matrix, parallel, stats, utils, statmod, MASS, ggrepel, lmerTest, foreach, modeest


See at CRAN