Statistical Methods for Microbiome Compositional Data

A suite of methods for powerful and robust microbiome data analysis addressing zero-inflation, phylogenetic structure and compositional effects (Zhou et al. (2021)). The methods can be applied to the analysis of other (high-dimensional) compositional data arising from sequencing experiments.


Reference manual

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1.0 by Jun Chen, 16 days ago

Browse source code at

Authors: Xianyang Zhang [aut] , Jun Chen [aut, cre] , Huijuan Zhou [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports ggplot2, matrixStats, Matrix, parallel, stats, utils, statmod, MASS, ggrepel, lmerTest, foreach, modeest

See at CRAN