Create an HTML Dashboard to Visualize Data from MAF File

Mutation Annotation Format (MAF) is a tabular data format used for storing genetic mutation data. For example, The Cancer Genome Atlas (TCGA) project has made MAF files from each project publicly available. This package contains a set of tools to easily create an HTML dashboard to summarize and visualize data from MAF file. The resulting HTML file serves as a self-contained report that can be used to explore the result. Mayank Tandon & Ashish Jain (2020) .


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install.packages("MAFDash")

0.1.0 by Ashish Jain, 25 days ago


https://github.com/ashishjain1988/MAFDash/


Browse source code at https://github.com/cran/MAFDash


Authors: Mayank Tandon [aut] , Ashish Jain [aut, cre] , Frederick National Laboratory For Cancer Research [cph]


Documentation:   PDF Manual  


GPL license


Imports DT, flexdashboard, maftools, bsplus, crosstalk, plotly, canvasXpress, dplyr, ComplexHeatmap, circlize, RColorBrewer, ggbeeswarm, ensurer, data.table, reshape2, GenomicRanges, IRanges, pheatmap

Depends on rmarkdown, knitr, htmltools, ggplot2, TCGAbiolinks

Suggests jsonlite


See at CRAN