Dynamical Systems Approach to Immune Response Modeling

Simulation models (apps) of various within-host immune response scenarios. The purpose of the package is to help individuals learn about within-host infection and immune response modeling from a dynamical systems perspective. All apps include explanations of the underlying models and instructions on what to do with the models.


DSAIRM 0.5.5

  • Improved way to download simulator functions
  • Fixed typos and other minor mistakes in app documentations.
  • Included functionality that allows shinyappsio deployment

DSAIRM 0.5.0

  • Complete rebuild of back-end and structure, changing from multiple independent shiny apps to a single one.
  • Some user-facing updates and enhancements.
  • Fixed typos and other minor mistakes in app documentations.

DSAIRM 0.4.0

  • Fully functional first release to CRAN.

DSAIRM 0.3.0

  • All apps done, some documentation not finished

DSAIRM 0.2.0

  • Most apps done

DSAIRM 0.1.0

  • This is the first draft of the package

Reference manual

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0.9.3 by Andreas Handel, 3 months ago

https://ahgroup.github.io/DSAIRM/, https://github.com/ahgroup/DSAIRM/

Report a bug at https://github.com/ahgroup/DSAIRM/issues

Browse source code at https://github.com/cran/DSAIRM

Authors: Andreas Handel [aut, cre] , Cody Dailey [ctb] , Yang Ge [ctb] , Spencer Hall [ctb] , Brian McKay [ctb] , Sina Solaimanpour [ctb] , Alexis Vittengl [ctb] , Henok Woldu [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports adaptivetau, boot, deSolve, dplyr, ggplot2, gridExtra, lhs, nloptr, plotly, rlang, stats, utils, XML

Depends on shiny

Suggests covr, devtools, knitr, pkgdown, rmarkdown, roxygen2, testthat

See at CRAN