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Cascade

Selection, Reverse-Engineering and Prediction in Cascade Networks

A modeling tool allowing gene selection, reverse engineering, and prediction in cascade networks. Jung, N., Bertrand, F., Bahram, S., Vallat, L., and Maumy-Bertrand, M. (2014) .

News

Cascade 1.7

  • Help pages were completed and examples added for every function. It required new datasets that were added to the package.

Cascade 1.6

  • Added a NEWS.md file to track changes to the package.
  • Package had to be splited and data shiped apart to CRAN in the CascadeData package

Cascade 1.5

  • Package and especially its code was transformed to cope with CRAN requirements

Cascade 1.0 - 1.5

  • Creation and review of the package

Reference manual

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install.packages("Cascade")

1.8 by Frederic Bertrand, a year ago

http://www-irma.u-strasbg.fr/~fbertran/, https://github.com/fbertran/Cascade

Report a bug at https://github.com/fbertran/Cascade/issues

Browse source code at https://github.com/cran/Cascade

Authors: Frederic Bertrand [cre, aut] , Myriam Maumy-Bertrand [aut] , Laurent Vallat [ctb] , Nicolas Jung [ctb]

Documentation:   PDF Manual  

GPL (>= 2) license

Imports abind, animation, cluster, grid, igraph, lars, lattice, limma, magic, methods, nnls, splines, stats4, survival, tnet, VGAM

Suggests R.rsp, CascadeData, knitr

Imported by SelectBoost.

See at CRAN

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