Bayesian Phylogeographic and Ecological Clustering

Model-based clustering for phylogeographic data comprising mtDNA sequences and geographical locations along with optional environmental characteristics, aiming to identify migration events that led to homogeneous population clusters. The package vignette, I. Manolopoulou, A. Hille, B. C. Emerson (2020) , provides detailed descriptions of the package.


Reference manual

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1.3.1 by Ioanna Manolopoulou, 2 years ago

Browse source code at

Authors: Ioanna Manolopoulou , Axel Hille

Documentation:   PDF Manual  

GPL-2 license

Imports ggplot2, igraph, mvtnorm, maptools, sp, phytools, fields, coda, methods, OpenStreetMap, ggmap, ape, utils

See at CRAN