Examples: visualization, C++, networks, data cleaning, html widgets, ropensci.

Found 349 packages in 0.01 seconds

tidyheatmaps — by Jan Broder Engler, 2 years ago

Heatmaps from Tidy Data

The goal of 'tidyheatmaps' is to simplify the generation of publication-ready heatmaps from tidy data. By offering an interface to the powerful 'pheatmap' package, it allows for the effortless creation of intricate heatmaps with minimal code.

tidygapminder — by Anicet Ebou, 6 years ago

Easily Tidy Gapminder Datasets

A toolset that allows you to easily import and tidy data sheets retrieved from Gapminder data web tools. It will therefore contribute to reduce the time used in data cleaning of Gapminder indicator data sheets as they are very messy.

stacr — by Chris Lyons, 8 days ago

Tidy 'STAC' Workflows for R

Wraps the 'rstac' package with a pipe-friendly, tidy API. All results return 'tibbles' instead of nested lists. Ships with a catalog registry of known 'STAC' endpoints including Planetary Computer, Earth Search, and 'USGS', while supporting any 'STAC' API URL.

rollup — by Ju Young Ahn, 2 years ago

A Tidy Grouping Set Aggregation

A Tidy implementation of 'grouping sets', 'rollup' and 'cube' - extensions of the 'group_by' clause that allow for computing multiple 'group_by' clauses in a single statement. For more detailed information on these functions, please refer to "Enhanced Aggregation, Cube, Grouping and Rollup" < https://cwiki.apache.org/confluence/display/Hive/Enhanced+Aggregation%2C+Cube%2C+Grouping+and+Rollup>.

tidyquant — by Matt Dancho, 4 days ago

Tidy Quantitative Financial Analysis

Bringing business and financial analysis to the 'tidyverse'. The 'tidyquant' package provides a convenient wrapper to various 'xts', 'zoo', 'quantmod', 'TTR' and 'PerformanceAnalytics' package functions and returns the objects in the tidy 'tibble' format. The main advantage is being able to use quantitative functions with the 'tidyverse' functions including 'purrr', 'dplyr', 'tidyr', 'ggplot2', 'lubridate', etc. See the 'tidyquant' website for more information, documentation and examples.

tidyGenR — by Miguel Camacho, a month ago

Tidy Multilocus Amplicon Genotypes

Variant determination and genotyping from high throughput sequences from multilocus amplicon libraries, typically sequenced in Illumina MiSeq or similar. It provides a set of core functions for the central steps: demultiplex by locus, truncate reads, variant calling, and genotype calling. Additionally, it provides a set of functions for diagnosis and estimation of best running parameters and multiple extensions for genotype/variants manipulation and reformatting. Output variants and genotypes are output in 'tidy' format, thus facilitating reformatting, manipulation and potential connection to other R packages.

tidynorm — by Josef Fruehwald, 5 months ago

Tools for Tidy Vowel Normalization

An implementation of tidy speaker vowel normalization. This includes generic functions for defining new normalization methods for points, formant tracks, and Discrete Cosine Transform coefficients, as well as convenience functions implementing established normalization methods. References for the implemented methods are: Johnson, Keith (2020) Lobanov, Boris (1971) Nearey, Terrance M. (1978) < https://sites.ualberta.ca/~tnearey/Nearey1978_compressed.pdf> Syrdal, Ann K., and Gopal, H. S. (1986) Watt, Dominic, and Fabricius, Anne (2002) < https://www.latl.leeds.ac.uk/article/evaluation-of-a-technique-for-improving-the-mapping-of-multiple-speakers-vowel-spaces-in-the-f1-f2-plane/>.

visPedigree — by Sheng Luan, 25 days ago

Tidying and Visualizing Animal Pedigrees

Built on graph theory and the high-performance 'data.table' framework, this package provides a comprehensive suite of tools for tidying, analyzing, and visualizing animal pedigrees. By modeling pedigrees as directed acyclic graphs using 'igraph', it ensures robust loop detection, efficient generation assignment, and optimal sub-population splitting. Key features include standardizing pedigree formats, flexible ancestry tracing, and generating legible vector-based PDF graphs. A unique compaction algorithm enables the visualization of massive pedigrees by grouping full-sib families. Furthermore, the package implements high-performance C++ algorithms for calculating and visualizing genetic relationship matrices (A, D, AA, and their inverses) and inbreeding coefficients.

tidyplots — by Jan Broder Engler, 2 months ago

Tidy Plots for Scientific Papers

The goal of 'tidyplots' is to streamline the creation of publication-ready plots for scientific papers. It allows to gradually add, remove and adjust plot components using a consistent and intuitive syntax.

eks — by Tarn Duong, 3 months ago

Tidy and Geospatial Kernel Smoothing

Extensions of the kernel smoothing functions from the 'ks' package for compatibility with the tidyverse and geospatial ecosystems .