A Tidy Implementation of 'ESTIMATE'

The 'ESTIMATE' package infers tumor purity from expression data as a function of immune and stromal infiltrate, but requires writing of intermediate files, is un-pipeable, and performs poorly when presented with modern datasets with current gene symbols. 'tidyestimate' a fast, tidy, modern reimagination of 'ESTIMATE' (2013) .

Tidy Population Genetics

We provide a tidy grammar of population genetics, facilitating the manipulation and analysis of data on biallelic single nucleotide polymorphisms (SNPs). 'tidypopgen' scales to very large genetic datasets by storing genotypes on disk, and performing operations on them in chunks, without ever loading all data in memory. The full functionalities of the package are described in Carter et al. (2025) .

Tidy Differential Privacy

A tidy-style interface for applying differential privacy to data frames. Provides pipe-friendly functions to add calibrated noise, compute private statistics, and track privacy budgets using the epsilon-delta differential privacy framework. Implements the Laplace mechanism (Dwork et al. 2006 ) and the Gaussian mechanism for achieving differential privacy as described in Dwork and Roth (2014) .

Tidy Flowchart Generator

Creates participant flow diagrams directly from a dataframe. Representing the flow of participants through each stage of a study, especially in clinical trials, is essential to assess the generalisability and validity of the results. This package provides a set of functions that can be combined with a pipe operator to create all kinds of flowcharts from a data frame in an easy way.

Tidy Tuning Tools

The ability to tune models is important. 'tune' contains functions and classes to be used in conjunction with other 'tidymodels' packages for finding reasonable values of hyper-parameters in models, pre-processing methods, and post-processing steps.

Tidy Finance Helper Functions

Helper functions for empirical research in financial economics, addressing a variety of topics covered in Scheuch, Voigt, and Weiss (2023) . The package is designed to provide shortcuts for issues extensively discussed in the book, facilitating easier application of its concepts. For more information and resources related to the book, visit < https://www.tidy-finance.org/r/index.html>.

Working with Sets the Tidy Way

Implements a class and methods to work with sets, doing intersection, union, complementary sets, power sets, cartesian product and other set operations in a "tidy" way. These set operations are available for both classical sets and fuzzy sets. Import sets from several formats or from other several data structures.

Tidy Standardized Mean Differences

Tidy standardized mean differences ('SMDs'). 'tidysmd' uses the 'smd' package to calculate standardized mean differences for variables in a data frame, returning the results in a tidy format.

Tidy Bayesian Vector Autoregression

Functions to prepare tidy objects from estimated models via 'BVAR' (see Kuschnig & Vashold, 2019 ) and visualisation thereof. Bridges the gap between estimating models with 'BVAR' and plotting the results in a more sophisticated way with 'ggplot2' as well as passing them on in a tidy format.

Tidy Structural Equation Modeling

A tidy workflow for generating, estimating, reporting, and plotting structural equation models using 'lavaan', 'OpenMx', or 'Mplus'. Throughout this workflow, elements of syntax, results, and graphs are represented as 'tidy' data, making them easy to customize. Includes functionality to estimate latent class analyses, and to plot 'dagitty' and 'igraph' objects.