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Interface to the 'C++' Library 'Pf'
Builds and runs 'c++' code for classes that encapsulate state space model, particle filtering algorithm pairs.
Algorithms include the Bootstrap Filter from Gordon et al. (1993)
C R Bytecode Compiler
Implements a bytecode compiler for 'R' in 'C', targeting functional parity with the base 'compiler' package, while focusing on better performance. The architecture mostly mirrors the original 'GNU-R' compiler as described in < https://homepage.cs.uiowa.edu/~luke/R/compiler/compiler.pdf>.
Distribution of the 'BayesX' C++ Sources
'BayesX' performs Bayesian inference in structured additive regression (STAR) models. The R package BayesXsrc provides the 'BayesX' command line tool for easy installation. A convenient R interface is provided in package R2BayesX.
Matching Algorithms in R and C++
Computes matching algorithms quickly using Rcpp. Implements the Gale-Shapley Algorithm to compute the stable matching for two-sided markets, such as the stable marriage problem and the college-admissions problem. Implements Irving's Algorithm for the stable roommate problem. Implements the top trading cycle algorithm for the indivisible goods trading problem.
Split, Combine and Compress PDF Files
Content-preserving transformations transformations of PDF files such as split, combine, and compress. This package interfaces directly to the 'qpdf' C++ library < https://qpdf.sourceforge.io/> and does not require any command line utilities. Note that 'qpdf' does not read actual content from PDF files: to extract text and data you need the 'pdftools' package.
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
An R wrapper around the fast T-distributed Stochastic Neighbor Embedding implementation by Van der Maaten (see < https://github.com/lvdmaaten/bhtsne/> for more information on the original implementation).
Advanced and Fast Data Transformation
A large C/C++-based package for advanced data transformation and
statistical computing in R that is extremely fast, class-agnostic, robust, and
programmer friendly. Core functionality includes a rich set of S3 generic grouped
and weighted statistical functions for vectors, matrices and data frames, which
provide efficient low-level vectorizations, OpenMP multithreading, and skip missing
values by default. These are integrated with fast grouping and ordering algorithms
(also callable from C), and efficient data manipulation functions. The package also
provides a flexible and rigorous approach to time series and panel data in R, fast
functions for data transformation and common statistical procedures, detailed
(grouped, weighted) summary statistics, powerful tools to work with nested data,
fast data object conversions, functions for memory efficient R programming, and
helpers to effectively deal with variable labels, attributes, and missing data. It
seamlessly supports base R objects/classes as well as 'units', 'integer64', 'xts'/
'zoo', 'tibble', 'grouped_df', 'data.table', 'sf', and 'pseries'/'pdata.frame'.
For a concise overview of the package see Krantz (2026)
Tools for Working with Posterior Distributions
Provides useful tools for both users and developers of packages
for fitting Bayesian models or working with output from Bayesian models.
The primary goals of the package are to:
(a) Efficiently convert between many different useful formats of
draws (samples) from posterior or prior distributions.
(b) Provide consistent methods for operations commonly performed on draws,
for example, subsetting, binding, or mutating draws.
(c) Provide various summaries of draws in convenient formats.
(d) Provide lightweight implementations of state of the art posterior
inference diagnostics. References: Vehtari et al. (2021)
'R' Access to the 'tskit C' API
'Tskit' enables efficient storage, manipulation, and analysis
of ancestral recombination graphs (ARGs) using succinct tree sequence
encoding. The tree sequence encoding of an ARG is described in Wong et
al. (2024)
'C++' Standard Template Library Containers
Use 'C++' Standard Template Library containers interactively in R. Includes sets, unordered sets, multisets, unordered multisets, maps, unordered maps, multimaps, unordered multimaps, stacks, queues, priority queues, vectors, deques, forward lists, and lists.