Handling Vegetation Data Sets

Import and handling data from vegetation-plot databases, especially data stored in 'Turboveg' (< https://www.synbiosys.alterra.nl/turboveg>). Also import/export routines for exchange of data with 'Juice' (< http://www.sci.muni.cz/botany/juice>) are implemented.


vegtable 0.1.4

New Features

  • New data set aspect_conv.
  • New function taxa2samples() for changing record names by their respective accepted names.
  • Function count_taxa() implemented for vegtable objects.


  • Updated data set Kenya_veg Including hierarchical ranks.


  • Function cross2db was not working properly for tables with only one column

vegtable 0.1.3


  • A method for numeric values in function transform().

vegtable 0.1.2

New Features

  • File inst/ChangeLog replaced by NEWS.md.
  • Method match_names() for vegtable objects.
  • New method layers2samples().
  • New method add_releves(), adding releves from data frames into vegtable objects.


  • No column LayerID in prototype for vegtable objects.
  • NA values are allowed for layers in slot samples.
  • Layers are not any more restricted to single plots.
  • Orphaned entries in slot layers will be deleted by function clean().
  • Argument match_header included in function veg_relation().
  • Validity check is not accepting NA values in TaxonUsageID at slot samples.
  • Validity check tests also the values of relations matching header with the respective relation.

vegtable 0.1.1

New Features

  • A method for function aggregate.
  • Slot layers added to vegtable objects.


  • Method subset working similarly to taxlist::subset.
  • Function clean does not modify slot species.
  • Function crosstable access also to taxon traits.
  • New argument use_nas for function crosstable.

vegtable 0.1.0

New Features

  • First delivery in CRAN.

Reference manual

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0.1.6 by Miguel Alvarez, a year ago


Report a bug at https://github.com/kamapu/vegtable/issues

Browse source code at https://github.com/cran/vegtable

Authors: Miguel Alvarez [aut, cre]

Documentation:   PDF Manual  

GPL (>= 2) license

Imports foreign, methods, plotKML, qdapRegex, sp, stringi, vegdata

Depends on taxlist

Suggests devtools, roxygen2, rmarkdown, vegan

See at CRAN