Handling taxonomic lists through objects of class 'taxlist'. This package provides functions to import species lists from 'Turboveg' (< https://www.synbiosys.alterra.nl/turboveg/>) and the possibility to create backups from resulting R-objects. Also quick displays are implemented as summary-methods.
print_name()(See this issue) at Stack Overflow.
backup_object(), the message will be done after successful saving and not before.
match_names(), for comparing strings only with accepted names.
add_synonym()was not properly working for incomplete entries (missing variables in the replacement values.)
load_last()was not properly working for values of
filewithout mention of subfolder.
show_traits=TRUEwas not displaying taxa with no entries for taxon traits.
taxlistwrongly included a slot hierarchy.
print_namefor formatting taxon names to italic style.
update_name, for updating information in slot
synonymsretrieving synonyms for indicated concepts.
delete_namefor deleting synonyms in
basionymfor handling basionyms.
accepted_nameretrieves also information on
Level(taxonomic rank) and traits (optional in argument
summaryfor single taxon is displaying the name of the parent taxon (accepted name) and optional a string for the taxon view.
backup_objectprints a message in the console.
Easplistadapted to new state of database SWEA-Dataveg.
match_namescounts multiple best matchings and includes a new argument
show_conceptsfor displaying the respective accepted names and taxon concept ID.
load_lastwas not working for single files with suffix, neither for absolute path or paths with underscores.
summaryfor single taxa was not displaying names that are homonyms to the accepted name.
load_lastto load last backup in an R-session.
dissect_namefor splitting names into their parts.
match_namesmatching character vectors with names of a
backup_objectis also working with relative paths.
add_viewwas not adding new columns in the respective slot.
tv2taxlistdoes not modify slot
load_lastwas not working with values of
levelinserted in function
cleanalso set keys to class
add_concept: wrong assignment of
taxlis-method) can be a character vector matching
vegdatamoved from Depends to Imports.
df2taxlistadapted to species lists with duplicated names.
keep_childrenimplemented in function
AuthorNamenot allowed in slot