Predicts the presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed from both the command line and GUI.
signalHsmm predicts presence of signal peptides in eukaryotic proteins using hidden semi-Markov models. The implemented algorithm can be accessed as a web-based service http://smorfland.uni.wroc.pl/shiny/signalHsmm/.
signalHsmm can be also used locally as the R package. It can be installed from CRAN using:
You can install the latest development version of the package directly from github:
After the installation, the GUI can be accessed locally:
All signalHsmm functionalities can be also invoked in the batch mode, for example: