Miscellaneous Tools for Sequence Analysis

It provides miscellaneous sequence analysis functions for describing episodes in individual sequences, measuring association between domains in multidimensional sequence analysis (see Piccarreta (2017) ), heat maps of sequence data, Globally Interdependent Multidimensional Sequence Analysis (see Robette et al (2015) ), smoothing sequences for index plots (see Piccarreta (2012) ), coding sequences for Qualitative Harmonic Analysis (see Deville (1982)), measuring stress from multidimensional scaling factors (see Piccarreta and Lior (2010) ), symmetrical (or canonical) Partial Least Squares (see Bry (1996)).


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install.packages("seqhandbook")

0.1.0 by Nicolas Robette, 3 months ago


Browse source code at https://github.com/cran/seqhandbook


Authors: Nicolas Robette


Documentation:   PDF Manual  


GPL (>= 2) license


Depends on TraMineR

Suggests knitr, rmarkdown, FactoMineR, GDAtools, RColorBrewer, TraMineRextras, WeightedCluster, ade4, cluster, questionr, rmdformats, dplyr, purrr, ggplot2


See at CRAN