Schloss Lab Tools for Reproducible Microbiome Research

A collection of useful functions and example code created and used by the Schloss Lab for reproducible microbiome research. Perform common tasks like read files created by mothur <>, tidy up your microbiome data, and format R Markdown documents for publication. See the website <> for more information, documentation, and examples.


Reference manual

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0.1.0 by Kelly Sovacool, 13 days ago

Browse source code at

Authors: Kelly Sovacool [aut, cre] , Nick Lesniak [aut] , Patrick Schloss [aut] , Sarah Lucas [ctb] , Courtney Armour [ctb] , Jacqueline Moltzau [ctb] , Andrew Hannah [ctb] , Nielson Baxter [ctb] , Alyxandria Schubert [ctb] , Kathryn Iverson [ctb]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports dplyr, formatR, rlang, tidyr

Suggests covr, knitr, purrr, rmarkdown, testthat

See at CRAN