Network-Based Gene Set Analysis

Carry out Network-based Gene Set Analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data.


Reference manual

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3.1.0 by Jing Ma, a year ago

Browse source code at

Authors: Jing Ma , Ali Shojaie and Kun Yue

Documentation:   PDF Manual  

GPL (>= 2) license

Imports graph, graphite, corpcor, dplyr, glmnet, glassoFast, igraph, Matrix, msigdbr, quadprog, rlang, magrittr

Suggests knitr, MASS, rmarkdown

See at CRAN