Construct Consensus Genetic Maps and Estimate Recombination Rates

Construct consensus genetic maps with LPmerge, see Endelman and Plomion (2014) and model the relationship between physical distance and genetic distance using thin-plate regression splines, see Wood (2003) . Perform quality control on input data and visualise intermediate steps.


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install.packages("mapfuser")

0.1.2 by Dennis van Muijen, 2 years ago


Browse source code at https://github.com/cran/mapfuser


Authors: Dennis van Muijen , Ram Kumar Basnet , Nathalie J. Dek


Documentation:   PDF Manual  


GPL-3 license


Imports dplyr, ggplot2, mgcv, doParallel, parallel, foreach, stringi, plotly, visNetwork, LPmerge, lazyeval, tidyr

Depends on igraph

Suggests knitr, rmarkdown


See at CRAN