Quantify Rhythmicity and Differential Rhythmicity in Genomic Data

Fit linear models based on periodic splines, moderate model coefficients using multivariate adaptive shrinkage, then compute properties of the moderated curves.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("limorhyde2")

0.1.1 by Jake Hughey, 9 months ago


https://limorhyde2.hugheylab.org, https://github.com/hugheylab/limorhyde2


Browse source code at https://github.com/cran/limorhyde2


Authors: Jake Hughey [aut, cre] , Dora Obodo [aut] , Elliot Outland [aut]


Documentation:   PDF Manual  


GPL-2 license


Imports abind, ashr, checkmate, data.table, DESeq2, foreach, HDInterval, iterators, limma, mashr, pbs, zeallot

Suggests cowplot, knitr, doParallel, ggplot2, glue, rmarkdown, testthat


See at CRAN