Landscape Epidemiology and Evolution

A spatio-temporal stochastic model to assess resistance deployment strategies against plant pathogens. The model is based on stochastic geometry for describing the landscape and the resistant hosts, a dispersal kernel for the dissemination of the pathogen, and a SEIR (Susceptible-Exposed-Infectious-Removed) architecture to simulate plant response to disease. Loup Rimbaud, Julien Papaïx, Jean-François Rey, Luke G Barrett, Peter H Thrall (2018) .


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0.0.7 by Jean-Francois Rey, 9 days ago

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Authors: Loup Rimbaud [aut] , Julien Papaix [aut] , Jean-Francois Rey [cre]

Documentation:   PDF Manual  

GPL (>= 2) | file LICENSE license

Imports sp, stats, Matrix, MASS, rgeos, maptools, fields, splancs, sf

Depends on methods, utils, grDevices, graphics, Rcpp, rgdal

Linking to Rcpp

System requirements: C++11, gsl, gdal >= 1.11.0

See at CRAN