Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices

Cross-species identification of novel gene candidates using the NCBI web service is provided. Further, sets of miRNA target genes can be identified by using the targetscan.org API.


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install.packages("hoardeR")

0.9.2 by Daniel Fischer, 4 months ago


Browse source code at https://github.com/cran/hoardeR


Authors: Daniel Fischer [aut, cre], Anu Sironen [aut]


Documentation:   PDF Manual  


Task views:


GPL (>= 2) license


Imports httr, XML, stringr, MASS, R.utils, data.table, seqinr, Biostrings, GenomicRanges, bamsignals, IRanges, Rsamtools, RCurl, GenomicTools

Suggests knitr, rmarkdown


See at CRAN