Analysis of Diversity

Functions, data sets and examples for the calculation of various indices of biodiversity including species, functional and phylogenetic diversity. Part of the indices are expressed in terms of equivalent numbers of species. The package also provides ways to partition biodiversity across spatial or temporal scales (alpha, beta, gamma diversities). In addition to the quantification of biodiversity, ordination approaches are available which rely on diversity indices and allow the detailed identification of species, functional or phylogenetic differences between communities.


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install.packages("adiv")

2.1 by Sandrine Pavoine, a month ago


Browse source code at https://github.com/cran/adiv


Authors: Sandrine Pavoine


Documentation:   PDF Manual  


Task views: Phylogenetics, Especially Comparative Methods


GPL (>= 2) license


Imports ade4, adegraphics, adephylo, ape, cluster, FactoMineR, graphics, grDevices, lpSolve, methods, phylobase, phytools, rgl, stats, utils


Imported by Rarefy.


See at CRAN