Dirichlet Multinomial Modeling of Relative Abundance Data

Implements Dirichlet multinomial modeling of relative abundance data using functionality provided by the 'Stan' software. The purpose of this package is to provide a user friendly way to interface with 'Stan' that is suitable for those new to modeling. For more regarding the modeling mathematics and computational techniques we use see our publication in Molecular Ecology Resources titled 'Dirichlet multinomial modeling outperforms alternatives for analysis of ecological count data' (Harrison et al. 2020 ).


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


1.0.0 by Joshua Harrison, 5 months ago

Browse source code at https://github.com/cran/CNVRG

Authors: Joshua Harrison [aut, cre] , Vivaswat Shastry [aut] , W. John Calder [aut] , C. Alex Buerkle [aut]

Documentation:   PDF Manual  

GPL-3 license

Imports methods, Rcpp, rstan, vegan, rstantools, tibble

Linking to BH, Rcpp, RcppEigen, RcppParallel, rstan, StanHeaders

System requirements: GNU make

See at CRAN