Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests

Contains functions for estimating above-ground biomass/carbon and its uncertainty in tropical forests. These functions allow to (1) retrieve and correct taxonomy, (2) estimate wood density and its uncertainty, (3) build height-diameter models, (4) manage tree and plot coordinates, (5) estimate above-ground biomass/carbon at stand level with associated uncertainty. To cite ‘BIOMASS’, please use citation(‘BIOMASS’). For more information, see Réjou-Méchain et al. (2017) .


BIOMASS

test-coverage.yaml R-CMD-check pkgdown CRAN/METACRAN Version

The package

The BIOMASS package allows users to estimate above ground biomass/carbon and its uncertainty in tropical forests.

The main implemented steps are as follows :

  1. retrieving and correcting tree taxonomy;
  2. estimating wood density and its uncertainty;
  3. building height-diameter models;
  4. estimating above ground biomass/carbon at stand level with associated uncertainty;
  5. managing tree and plot coordinates.

For more information, see Réjou-Méchain et al. (2017)

Install BIOMASS

The latest released version from CRAN:

install.packages("BIOMASS")

The latest version from Github (in development):

install.packages("remotes")
remotes::install_github('umr-amap/BIOMASS')

To use it :

library("BIOMASS")

Tutorials/Vignettes

Two vignettes are available in the 'Articles' section of the following page : https://umr-amap.github.io/BIOMASS/index.html

Shiny application

Access the shiny version of the BIOMASS package at https://amap-apps.cirad.fr/apps/biomass-app/

Citation

Please cite this package as:

Réjou-Méchain M, Tanguy A, Piponiot C, Chave J, Herault B (2017). “BIOMASS : an R package for estimating above-ground biomass and its uncertainty in tropical forests.” Methods in Ecology and Evolution, 8(9). ISSN 2041210X, doi:10.1111/2041-210X.12753.

Or you can also run

citation("BIOMASS")

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("BIOMASS")

2.2.7-1 by Dominique Lamonica, 3 months ago


https://umr-amap.github.io/BIOMASS/, https://github.com/umr-amap/BIOMASS/


Report a bug at https://github.com/umr-amap/BIOMASS/issues/


Browse source code at https://github.com/cran/BIOMASS


Authors: Dominique Lamonica [aut, cre] , Maxime Réjou-Méchain [aut, dtc] , Arthur Bailly [aut] , Guillaume Cornu [aut] , John Godlee [ctb] , Fabian Fischer [ctb] , Jerome Chave [ctb] , Arthur Pere [aut] , Ariane Tanguy [aut] , Camille Piponiot [aut] , Bruno Hérault [aut] , Philippe Verley [ctb] , Ted Feldpausch [dtc]


Documentation:   PDF Manual  


GPL-2 license


Imports minpack.lm, jsonlite, methods, proj4, graphics, stats, utils, data.table, rappdirs, sf, terra, ggplot2, ggnewscale

Suggests knitr, rmarkdown, prettydoc, testthat, vdiffr, curl, geodata, httr2, pkgdown, dplyr, brms, BH, RcppEigen


See at CRAN