Examples: visualization, C++, networks, data cleaning, html widgets, ropensci.

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config — by Andrie de Vries, 3 years ago

Manage Environment Specific Configuration Values

Manage configuration values across multiple environments (e.g. development, test, production). Read values using a function that determines the current environment and returns the appropriate value.

broom.mixed — by Ben Bolker, 4 months ago

Tidying Methods for Mixed Models

Convert fitted objects from various R mixed-model packages into tidy data frames along the lines of the 'broom' package. The package provides three S3 generics for each model: tidy(), which summarizes a model's statistical findings such as coefficients of a regression; augment(), which adds columns to the original data such as predictions, residuals and cluster assignments; and glance(), which provides a one-row summary of model-level statistics.

FactoMineR — by Francois Husson, 16 days ago

Multivariate Exploratory Data Analysis and Data Mining

Exploratory data analysis methods to summarize, visualize and describe datasets. The main principal component methods are available, those with the largest potential in terms of applications: principal component analysis (PCA) when variables are quantitative, correspondence analysis (CA) and multiple correspondence analysis (MCA) when variables are categorical, Multiple Factor Analysis when variables are structured in groups, etc. and hierarchical cluster analysis. F. Husson, S. Le and J. Pages (2017).

psych — by William Revelle, a month ago

Procedures for Psychological, Psychometric, and Personality Research

A general purpose toolbox developed originally for personality, psychometric theory and experimental psychology. Functions are primarily for multivariate analysis and scale construction using factor analysis, principal component analysis, cluster analysis and reliability analysis, although others provide basic descriptive statistics. Item Response Theory is done using factor analysis of tetrachoric and polychoric correlations. Functions for analyzing data at multiple levels include within and between group statistics, including correlations and factor analysis. Validation and cross validation of scales developed using basic machine learning algorithms are provided, as are functions for simulating and testing particular item and test structures. Several functions serve as a useful front end for structural equation modeling. Graphical displays of path diagrams, including mediation models, factor analysis and structural equation models are created using basic graphics. Some of the functions are written to support a book on psychometric theory as well as publications in personality research. For more information, see the < https://personality-project.org/r/> web page.

S7 — by Hadley Wickham, 2 months ago

An Object Oriented System Meant to Become a Successor to S3 and S4

A new object oriented programming system designed to be a successor to S3 and S4. It includes formal class, generic, and method specification, and a limited form of multiple dispatch. It has been designed and implemented collaboratively by the R Consortium Object-Oriented Programming Working Group, which includes representatives from R-Core, 'Bioconductor', 'Posit'/'tidyverse', and the wider R community.

doRNG — by Emilio L. Sáenz Guillén, 5 months ago

Generic Reproducible Parallel Backend for 'foreach' Loops

Provides functions to perform reproducible parallel foreach loops, using independent random streams as generated by L'Ecuyer's combined multiple-recursive generator [L'Ecuyer (1999), ]. It enables to easily convert standard '%dopar%' loops into fully reproducible loops, independently of the number of workers, the task scheduling strategy, or the chosen parallel environment and associated foreach backend.

rlecuyer — by Hana Sevcikova, 3 years ago

R Interface to RNG with Multiple Streams

Provides an interface to the C implementation of the random number generator with multiple independent streams developed by L'Ecuyer et al (2002). The main purpose of this package is to enable the use of this random number generator in parallel R applications.

factoextra — by Alboukadel Kassambara, 13 hours ago

Extract and Visualize the Results of Multivariate Data Analyses

Provides easy-to-use functions to extract and visualize the output of multivariate data analyses, including 'PCA' (Principal Component Analysis), 'CA' (Correspondence Analysis), 'MCA' (Multiple Correspondence Analysis), 'FAMD' (Factor Analysis of Mixed Data), 'MFA' (Multiple Factor Analysis), and 'HMFA' (Hierarchical Multiple Factor Analysis) from different R packages. It also includes support for supplementary qualitative variables in 'FactoMineR' 'FAMD' and 'MFA' workflows, hardened validation for clustering and dimension-reduction helper workflows, backward-compatible phylogenetic dendrogram layout support for current 'igraph' APIs, and 'ggplot2'-based data visualization.

mice — by Stef van Buuren, 7 months ago

Multivariate Imputation by Chained Equations

Multiple imputation using Fully Conditional Specification (FCS) implemented by the MICE algorithm as described in Van Buuren and Groothuis-Oudshoorn (2011) . Each variable has its own imputation model. Built-in imputation models are provided for continuous data (predictive mean matching, normal), binary data (logistic regression), unordered categorical data (polytomous logistic regression) and ordered categorical data (proportional odds). MICE can also impute continuous two-level data (normal model, pan, second-level variables). Passive imputation can be used to maintain consistency between variables. Various diagnostic plots are available to inspect the quality of the imputations.

miceadds — by Alexander Robitzsch, a month ago

Some Additional Multiple Imputation Functions, Especially for 'mice'

Contains functions for multiple imputation which complements existing functionality in R. In particular, several imputation methods for the mice package (van Buuren & Groothuis-Oudshoorn, 2011, ) are implemented. Main features of the miceadds package include plausible value imputation (Mislevy, 1991, ), multilevel imputation for variables at any level or with any number of hierarchical and non-hierarchical levels (Grund, Luedtke & Robitzsch, 2018, ; van Buuren, 2018, Ch.7, ), imputation using partial least squares (PLS) for high dimensional predictors (Robitzsch, Pham & Yanagida, 2016), nested multiple imputation (Rubin, 2003, ), substantive model compatible imputation (Bartlett et al., 2015, ), and features for the generation of synthetic datasets (Reiter, 2005, ; Nowok, Raab, & Dibben, 2016, ).