Detect Population Structure Within Phylogenetic Trees

Algorithms for detecting population structure from the history of coalescent events recorded in phylogenetic trees. This method classifies each tip and internal node of a tree into disjoint sets characterized by similar coalescent patterns. The methods are described in Volz, E., Wiuf, C., Grad, Y., Frost, S., Dennis, A., & Didelot, X. (2020) .


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install.packages("treestructure")

0.1.0 by Erik Volz, 7 months ago


Browse source code at https://github.com/cran/treestructure


Authors: Erik Volz


Documentation:   PDF Manual  


GPL (>= 2) license


Imports ape

Suggests ggtree, ggplot2, knitr

Linking to Rcpp


See at CRAN