A Method for Simulating Data from Perturbed Biological Pathways

Simulate data from a Gaussian graphical model or a Gaussian Bayesian network in two conditions. Given a covariance matrix of a reference condition simulate plausible disregulations. See Salviato et al. (2017) .


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install.packages("simPATHy")

0.5 by Elisa Salviato, 4 months ago


Browse source code at https://github.com/cran/simPATHy


Authors: Elisa Salviato [aut, cre] , Vera Djordjilovic [aut] , Chiara Romualdi [aut] , Monica Chiogna [aut]


Documentation:   PDF Manual  


AGPL-3 license


Imports mvtnorm, gRbase, graph, igraph, ggm, qpgraph, R.utils, htmlwidgets, shiny, shinydashboard, grDevices, graphics

Suggests knitr, rmarkdown, clipper


See at CRAN