Quality Control Metrics for Gene Signatures

Provides gene signature quality control metrics in publication ready plots. Namely, enables the visualization of properties such as expression, variability, correlation, and comparison of methods of standardisation and scoring metrics.

signature QC protocol


Reference manual

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0.1.20 by Francesca Buffa, 4 days ago

Browse source code at https://github.com/cran/sigQC

Authors: Andrew Dhawan [aut], Alessandro Barberis [aut], Wei-Chen Cheng [aut], Francesca Buffa [aut, cre]

Documentation:   PDF Manual  

file LICENSE license

Imports MASS, lattice, KernSmooth, cluster, nnet, class, gridGraphics, biclust, gplots, ComplexHeatmap, RankProd, fmsb, moments, grDevices, graphics, stats, utils, mclust, GSVA, circlize

Suggests knitr, rmarkdown

See at CRAN