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pafr

Read, Manipulate and Visualize 'Pairwise mApping Format' Data

Provides functions to read, process and visualize pairwise sequence alignments in the 'PAF' format used by 'minimap2' and other whole-genome aligners. 'minimap2' is described by Li H. (2018) .

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Reference manual

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install.packages("pafr")

0.0.2 by David Winter, 2 months ago

https://dwinter.github.io/pafr/

Report a bug at https://github.com/dwinter/pafr/issues

Browse source code at https://github.com/cran/pafr

Authors: David Winter [aut, cre] , Kate Lee [ctb] , Murray Cox [ctb]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports dplyr, tibble, stringr, rlang

Depends on ggplot2

Suggests testthat, covr, knitr, ggpubr, rmarkdown, microbenchmark

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