Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses

Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history. See K. Bartoszek, J, Pienaar, P. Mostad, S. Andersson, T. F. Hansen (2012) and K. Bartoszek, and J. Tredgett Clarke, J. Fuentes-Gonzalez, V. Mitov, J. Pienaar, M. Piwczynski, R. Puchalka, K. Spalik, K. L. Voje (2024) . The suggested PCMBaseCpp package (which significantly speeds up the likelihood calculations) can be obtained from < https://github.com/venelin/PCMBaseCpp/>.


Reference manual

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install.packages("mvSLOUCH")

2.7.7 by Krzysztof Bartoszek, a year ago


Browse source code at https://github.com/cran/mvSLOUCH


Authors: Krzysztof Bartoszek [cre, aut] , John Clarke [ctb] , Jesualdo Fuentes-Gonzalez [ctb] , Jason Pienaar [ctb]


Documentation:   PDF Manual  


GPL (>= 2) | file LICENCE license


Imports ape, graphics, methods, mvtnorm, Matrix, ouch, PCMBase, stats, matrixcalc

Depends on abind

Suggests PCMBaseCpp, ggplot2, knitr, rmarkdown, mvMORPH, testthat


Imported by pcmabc.

Suggested by GLSME, PCMBase.


See at CRAN