A Network Tool to Dissect Spatial Community Ecology

Most existing approaches for network reconstruction can only infer an overall network and, also, fail to capture a complete set of network properties. To address these issues, a new model has been developed, which converts static data into their 'dynamic' form. 'idopNetwork' is an 'R' interface to this model, it can inferring informative, dynamic, omnidirectional and personalized networks. For more information on functional clustering part, see Kim et al. (2008) , Wang et al. (2011) . For more information on our model, see Chen et al. (2019) , and Cao et al. (2022) .

idopNetwork

Most existing approaches for network reconstruction can only infer an overall network and, also, fail to capture a complete set of network properties. To address these issues, a new model has been developed, which converts static data into their ‘dynamic’ form. ‘idopNetwork’ can inferring informative, dynamic, omnidirectional and personalized networks.

Installation

You can install the development version of idopNetwork from GitHub with:

# install.packages("devtools")
devtools::install_github("cxzdsa2332/idopNetwork")

Vignette

We demonstrate how to use idopNetwork package to analysis gut microbiota and mustard microbiota data.(https://cxzdsa2332.github.io/idopNetwork/articles/idopNetwork_vignette.html)