Query 'HaploReg' and 'RegulomeDB'

A set of utilities for querying 'HaploReg' < http://archive.broadinstitute.org/mammals/haploreg/haploreg.php> and 'RegulomeDB' < http://www.regulomedb.org> web-based tools. The package connects to 'HaploReg' or 'RegulomeDB', searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.


Reference manual

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1.6.2 by Ilya Y. Zhbannikov, a month ago

Browse source code at https://github.com/cran/haploR

Authors: Ilya Y. Zhbannikov [aut, cre], Anatoliy I Yashin [ctb] (Anatoliy supervised the technical/software development and is a Principal Invesigator of this project)

Documentation:   PDF Manual  

GPL-3 license

Imports httr, XML, tibble, RUnit, plyr

Suggests knitr, rmarkdown, openxlsx

See at CRAN