Query HaploReg and RegulomeDB

A set of utilities for querying HaploReg < http://archive.broadinstitute.org/mammals/haploreg/haploreg.php> and RegulomeDB < http://www.regulomedb.org> web-based tools. The package connects to HaploReg or RegulomeDB, searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.


Reference manual

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1.4.6 by Ilya Y. Zhbannikov, 16 days ago

Browse source code at https://github.com/cran/haploR

Authors: Ilya Y. Zhbannikov [aut, cre], Konstantin G Arbeev [ctb] (Konstantin supervised the technical/software development.), Anatoliy I Yashin [ctb] (Anatoliy supervised the technical/software development and is a Principal Invesigator of this project)

Documentation:   PDF Manual  

GPL-3 license

Imports httr, XML, tibble, RUnit

Suggests knitr, rmarkdown, openxlsx

See at CRAN