gwsem

Genome-Wide Structural Equation Modeling

Melds genome-wide association tests with structural equation modeling (SEM) using 'OpenMx'. This package contains low-level C/C++ code to rapidly read genetic data encoded in U.K. Biobank or 'plink' formats. Prebuilt modeling options include one and two factor models. Alternately, analyses may utilize arbitrary, user-provided SEMs. See Verhulst, Maes, & Neale (2017) for details. An updated manuscript is in preparation.

News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.
install.packages("gwsem")

0.1.5 by Joshua N. Pritikin, 4 days ago

https://github.com/jpritikin/gwsem

Report a bug at https://github.com/jpritikin/gwsem/issues

Browse source code at https://github.com/cran/gwsem

Authors: Joshua N. Pritikin [aut, cre] , Bradley Verhulst [cph] , Gavin Band [cph] , Yann Collet [cph] , Facebook , Inc. [cph] , Yuta Mori [cph] , Shaun Purcell [cph] , Christopher Chang [cph] , Wojciech Mula [cph] , Kim Walisch [cph]

Documentation:   PDF Manual  

GPL (>= 3) license

Imports data.table, methods

Depends on OpenMx

Suggests testthat, MASS, covr, knitr, rmarkdown, qqman

Linking to BH

System requirements: GNU make

See at CRAN

R links

R homepage

Download R

Mailing lists

R documentation

R manuals

R FAQs

The R Journal

CRAN links

CRAN homepage

CRAN repository policy

Submit a package

METACRAN stuff

About METACRAN

At github

Report a bug