Handling, Visualisation and Analysis of Epidemiological Contacts

A collection of tools for representing epidemiological contact data, composed of case line lists and contacts between cases. Also contains procedures for data handling, interactive graphics, and statistics.


epicontacts 1.1.0 (2017-11-20)


  • vis_epicontacts() now accepts fontawesome icon codes for node shapes

  • graph3D() will now plot an igraph object direct thanks to updates in threejs API

epicontacts 1.0.1 (2017-05-11)


  • make_epicontacts now handles contacts provided as factors

  • added URL of website and issue system to DESCRIPTION

  • replaced javascript graphics in README.md with screenshots - these were not rendering on github

epicontacts 1.0.0 (2017-04-27)

  • epicontacts now available on CRAN!

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


1.1.2 by Finlay Campbell, a month ago


Report a bug at https://github.com/reconhub/epicontacts/issues

Browse source code at https://github.com/cran/epicontacts

Authors: Finlay Campbell [aut, cre] , Thibaut Jombart [aut] , Nistara Randhawa [aut] , Bertrand Sudre [aut] , VP Nagraj [aut] , Thomas Crellen [aut] , Zhian N. Kamvar [aut]

Documentation:   PDF Manual  

GPL (>= 2) license

Imports grDevices, dplyr, igraph, visNetwork, threejs, colorspace, methods

Suggests outbreaks, testthat, covr, shiny, readr, knitr, rmarkdown

Imported by epiflows.

Suggested by outbreaker2.

See at CRAN