Automated Analysis of Multiplex Digital PCR Data

The automated clustering and quantification of the digital PCR data is based on the combination of 'DBSCAN' (Hahsler et al. (2019) ) and 'c-means' (Bezdek et al. (1981) ) algorithms. The analysis is independent of multiplexing geometry, dPCR system, and input amount. The details about input data and parameters are available in the vignette.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


1.0.4 by Alfonso De Falco, 6 months ago

Browse source code at

Authors: Alfonso De Falco [aut, cre] , Michel Mittelbronn [ctb] , Christophe Olinger [ctb] , Daniel Stieber [ctb] , Laboratoire national de santé [cph]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports dbscan, e1071, exactci, ggplot2, ggpubr, graphics, raster, rlist, scales, shiny, shinyjs, stats, stringr, utils

Suggests knitr, rmarkdown, testthat

See at CRAN