Easy Concatenation of Fasta Sequences

Concatenation of multiple sequence alignments based on a correspondence table that can be edited in Excel .

concatipede: an R package to concatenate fasta sequences easily

This package allows to concatenate sequences from multiple Multiple Sequence Alignments based on a correspondence table.

How to install concatipede

For now you can install the package directly from Gitlab with:

# Run inside an R session
install.packages("devtools")
devtools::install_github("tardipede/concatipede")

Please let us know if you encounter any issues during the package installation!

How to use concatipede

You can get started with this example vignette.

Contact

[email protected]

Citation

Please cite this package as: Vecchi M. & Bruneaux M. (2021). concatipede: an R package to concatenate fasta sequences easily. http://doi.org/10.5281/zenodo.5130603