Projected t-SNE for Batch Correction

Implements the projected t-SNE method for batch correction of high-dimensional data. Please see Aliverti et al. (2020) for more information.


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Reference manual

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install.packages("bcTSNE")

0.10.0 by Dayne L Filer, 6 months ago


https://github.com/emanuelealiverti/BC_tSNE


Browse source code at https://github.com/cran/bcTSNE


Authors: Dayne L Filer [aut, cre] , Emanuele Aliverti [aut] , Jeff Tilson [aut] , Kirk C Wilhelmsen [aut] , David B Dunson [aut]


Documentation:   PDF Manual  


GPL-3 license


Imports stats, RSpectra, utils, Rtsne, graphics

Suggests data.table, batchelor, kBET, splatter, scater, knitr, lisi, harmony, dlfUtils, xtable

System requirements: GNU make


See at CRAN