Functions for kernel-regression-based association tests including Burden test, SKAT and SKAT-O. These methods aggregate individual SNP score statistics in a SNP set and efficiently compute SNP-set level p-values.
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Seunggeun (Shawn) Lee, 4 months ago
Browse source code at
Seunggeun (Shawn) Lee and Zhangchen Zhao
with contributions from Larisa Miropolsky and Michael Wu
GPL (>= 2)
Depends on Matrix, SPAtest
GBJ, MetaSKAT, SMUT, zfa.
Depended on by
FSTpackage, GenoScan, LGEWIS, LGRF, Mega2R, WGScan.
BGData, FastKM, seqMeta, seqminer.
See at CRAN