Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference

Scelestial infers a lineage tree from single-cell DNA mutation matrix. It generates a tree with approximately maximum parsimony through a Steiner tree approximation algorithm.


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Reference manual

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install.packages("RScelestial")

1.0.0 by Mohammad Hadi Foroughmand Araabi, 3 months ago


Browse source code at https://github.com/cran/RScelestial


Authors: Mohammad Hadi Foroughmand Araabi [aut, cre] , Sama Goliaei [aut, ctb] , Alice McHardy [ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp

Suggests igraph, knitr

Linking to Rcpp

System requirements: C++11


See at CRAN