Microarray Data Analysis

Set of functions designed to simplify transcriptome analysis and identification of marker molecules using microarrays data. The package includes a set of functions that allows performing full pipeline of analysis including data normalization, summarisation, binary classification, FDR (False Discovery Rate) multiple comparison and the definition of potential biological markers.


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Reference manual

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install.packages("MiDA")

0.1.2 by Elena Filatova, 2 years ago


Browse source code at https://github.com/cran/MiDA


Authors: Elena Filatova [aut, cre] , Nikolai Sakharnov [dtc] , Dmitry Knyazev [dtc] , Oleg Utkin [dtc] , Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod , Russia [fnd]


Documentation:   PDF Manual  


GPL-3 license


Imports caret, gbm, genefilter, graphics, limma, preprocessCore, pROC, stats, SQN


See at CRAN