Microarray Data Analysis

Set of functions designed to simplify transcriptome analysis and identification of marker molecules using microarrays data. The package includes a set of functions that allows performing full pipeline of analysis including data normalization, summarisation, binary classification, FDR (False Discovery Rate) multiple comparison and the definition of potential biological markers.


Reference manual

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0.1.2 by Elena Filatova, 2 years ago

Browse source code at https://github.com/cran/MiDA

Authors: Elena Filatova [aut, cre] , Nikolai Sakharnov [dtc] , Dmitry Knyazev [dtc] , Oleg Utkin [dtc] , Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod , Russia [fnd]

Documentation:   PDF Manual  

GPL-3 license

Imports caret, gbm, genefilter, graphics, limma, preprocessCore, pROC, stats, SQN

See at CRAN