Dynamic Assembly Model of Colonization, Local Extinction and Speciation

Simulates and computes (maximum) likelihood of a dynamical model of community assembly that takes into account phylogenetic history.


Reference manual

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2.3 by Rampal S. Etienne, a year ago

Browse source code at https://github.com/cran/DAMOCLES

Authors: Rampal S. Etienne & Alex L. Pigot

Documentation:   PDF Manual  

Task views: Phylogenetics, Especially Comparative Methods

GPL-2 license

Imports caper, ape, deSolve, matrixStats, expm, picante, Matrix, DDD, stats, methods, Hmisc

Suggests testthat

See at CRAN