Dynamic Assembly Model of Colonization, Local Extinction and Speciation

Simulates and computes (maximum) likelihood of a dynamical model of community assembly that takes into account phylogenetic history.


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Reference manual

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install.packages("DAMOCLES")

1.1 by Rampal S. Etienne, 4 years ago


Browse source code at https://github.com/cran/DAMOCLES


Authors: Rampal S. Etienne & Alex L. Pigot


Documentation:   PDF Manual  


Task views: Phylogenetics, Especially Comparative Methods


GPL-2 license


Imports expm, picante

Depends on geiger, caper, ape, deSolve, matrixStats


See at CRAN