Generalized Pairwise Comparisons

Implementation of the Generalized Pairwise Comparisons (GPC) as defined in Buyse (2010) for complete observations, and extended in Peron (2018) to deal with right-censoring. GPC compare two groups of observations (intervention vs. control group) regarding several prioritized endpoints to estimate the probability that a random observation drawn from one group performs better/worse/equivalently than a random observation drawn from the other group. Summary statistics such as the net treatment benefit, win ratio, or win odds are then deduced from these probabilities. Confidence intervals and p-values are obtained based on asymptotic results (Ozenne 2021 ), non-parametric bootstrap, or permutations. The software enables the use of thresholds of minimal importance difference, stratification, non-prioritized endpoints (O Brien test), and can handle right-censoring and competing-risks.


Reference manual

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install.packages("BuyseTest")

3.3.9 by Brice Ozenne, 4 months ago


https://github.com/bozenne/BuyseTest


Report a bug at https://github.com/bozenne/BuyseTest/issues


Browse source code at https://github.com/cran/BuyseTest


Authors: Brice Ozenne [aut, cre] (ORCID: , Eva Cantagallo [aut] , William Anderson [aut] , Julien Peron [ctb] , Johan Verbeeck [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports data.table, doSNOW, foreach, ggplot2, methods, lava, parallel, prodlim, riskRegression, rlang, scales, stats, stats4, utils

Depends on Rcpp

Suggests cvAUC, mvtnorm, pbapply, pROC, R.rsp, survival, testthat

Linking to Rcpp, RcppArmadillo


See at CRAN