Biodiversity Assessment Tools

Includes algorithms to assess alpha and beta diversity in all their dimensions (taxonomic, phylogenetic and functional). It allows performing a number of analyses based on species identities/abundances, phylogenetic/functional distances, trees, convex-hulls or kernel density n-dimensional hypervolumes depicting species relationships. Cardoso et al. (2015) .

Population Fisher Information Matrix

Evaluate or optimize designs for nonlinear mixed effects models using the Fisher Information matrix. Methods used in the package refer to Mentré F, Mallet A, Baccar D (1997) , Retout S, Comets E, Samson A, Mentré F (2007) , Bazzoli C, Retout S, Mentré F (2009) , Le Nagard H, Chao L, Tenaillon O (2011) , Combes FP, Retout S, Frey N, Mentré F (2013) and Seurat J, Tang Y, Mentré F, Nguyen TT (2021) .

Deprecated 'classic' 'Rcpp' 'API'

The 'RcppClassic' package provides a deprecated C++ library which facilitates the integration of R and C++. New projects should use the new 'Rcpp' 'API' in the 'Rcpp' package.

Interface for Masked Autoregressive Flows

Interfaces the 'python' library 'zuko' implementing Masked Autoregressive Flows. See Rozet, Divo and Schnake (2023) and Papamakarios, Pavlakou and Murray (2017) .

Tools for Eurostat Open Data

Tools to download data from the Eurostat database < https://ec.europa.eu/eurostat> together with search and manipulation utilities.

Reapportion Data from One Geography to Another

A port of the 'spReapportion' package, using Simple Features in order to lose the dependencies to the retired 'maptools' and 'rgeos' packages.

GPL Palettes Copied from 'Gimp' and 'Inkscape'

A set of palettes imported from 'Gimp' distributed under GPL3 (< https://www.gimp.org/about/COPYING>), and 'Inkscape' distributed under GPL2 (< https://inkscape.org/about/license/>).

Perform Factorial Analysis from 'FactoMineR' with a Shiny Application

Perform factorial analysis with a menu and draw graphs interactively thanks to 'FactoMineR' and a Shiny application.

Distributions that are Sometimes Used in Hydrology

Probability distributions that are sometimes useful in hydrology.

Coalescent-Based Simulation of Ecological Communities

Coalescent-Based Simulation of Ecological Communities as proposed by Munoz et al. (2018) . The package includes a tool for estimating parameters of community assembly by using Approximate Bayesian Computation.