Calculate Indices of Dynamic Interaction for Wildlife Tracking Data

Dynamic interaction refers to spatial-temporal associations in the movements of two (or more) animals. This package provides tools for calculating a suite of indices used for quantifying dynamic interaction with wildlife telemetry data. For more information on each of the methods employed see the references within. The package (as of version 0.3) also has new tools for automating contact analysis in large tracking datasets. The package draws heavily on the classes and methods developed in the 'adehabitat' packages.


News

wildlifeDI 0.3.0

*April 12, 2019 - This is a bunch of new functions to go along with a new paper under preparation - Added whole suite of contact analysis functions - Added GetTO function - Added new functionality to Prox, to allow for one-way mapping of proximity analysis - Added Benhamou Significance test to DI function - Added local analysis to IAB and DI functions

wildlifeDI 0.2

*Dec. 14, 2014 - Added three new functions to the package. - The IAB interaction statistic from Benhamou et al. (2014). - checkTO, a function which identifies if and when two telemetry datasets overlap (temporally). - contacts function, used to map point locations of contacts from telemetry data.

wildlifeDI 0.1

  • Aug. 14, 2014 - Changed package name from ditools to wildlifeDI for uploading to CRAN.

  • May. 19, 2014 - Fixed some issues in the documentation, changed default set-up of Lixn statistic.

  • Mar. 12, 2014 - Added new datasets: deer37 and deer38. Containing GPS fixes for a one week interval in March 2005 for two individual deer.

  • Oct. 24, 2013 - Fixed an error in GetSimultaneous influencing symmetry with irregular trajectories.

  • Feb. 11, 2013 - Fixed an error in calculation of Shirabe, if you are using this metric please re-run your analyses.

  • Dec. 10, 2012 - Formally added the Prox functionality to the toolset - added use of ld(), dl() everywhere to facilitate trajects with bursts

  • Nov. 14, 2012 - added as.numeric around denominator in Minta chiINT calculation

  • Nov. 13, 2012 - added check for legnth of intersection vectors in Minta

  • Nov. 8, 2012 - added check in Minta to see if HR overlaps, or contains other HR - Fixed a typo in ChiSquare test in Minta

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("wildlifeDI")

0.3.0 by Jed Long, 4 months ago


https://github.com/jedalong/wildlifeDI


Browse source code at https://github.com/cran/wildlifeDI


Authors: Jed Long [aut, cre]


Documentation:   PDF Manual  


Task views: Handling and Analyzing Spatio-Temporal Data


GPL-3 license


Imports sp, rgeos, adehabitatLT, stats, graphics

Suggests knitr, adehabitatHR


See at CRAN