Whitening and High-Dimensional Canonical Correlation Analysis

Implements the whitening methods (ZCA, PCA, Cholesky, ZCA-cor, and PCA-cor) discussed in Kessy, Lewin, and Strimmer (2018) "Optimal whitening and decorrelation", , as well as the whitening approach to canonical correlation analysis allowing negative canonical correlations described in Jendoubi and Strimmer (2019) "A whitening approach to probabilistic canonical correlation analysis for omics data integration", . The package also offers functions to simulate random orthogonal matrices, compute (correlation) loadings and explained variation. It also contains four example data sets (extended UCI wine data, TCGA LUSC data, nutrimouse data, extended pitprops data).


Reference manual

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install.packages("whitening")

1.4.0 by Korbinian Strimmer, 4 years ago


https://strimmerlab.github.io/software/whitening/


Browse source code at https://github.com/cran/whitening


Authors: Korbinian Strimmer , Takoua Jendoubi , Agnan Kessy , Alex Lewin


Documentation:   PDF Manual  


GPL (>= 3) license


Imports stats

Depends on corpcor


Imported by BSL, pfica.

Suggested by FRESA.CAD, decorrelate, sensitivity.


See at CRAN