Manipulation of Matched Phylogenies and Data using 'data.table'

An implementation that combines trait data and a phylogenetic tree (or trees) into a single object of class treedata.table. The resulting object can be easily manipulated to simultaneously change the trait- and tree-level sampling. Currently implemented functions allow users to use a 'data.table' syntax when performing operations on the trait dataset within the treedata.table object.


Reference manual

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0.1.0 by Cristian Roman-Palacios, a year ago (website)

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Browse source code at

Authors: Josef Uyeda [aut] , Cristian Roman-Palacios [cre] , April Wright [aut] , Luke Harmon [ctb] , Hugo Gruson [rev] , Kari Norman [rev]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports lazyeval, ape, geiger, utils, data.table

Suggests knitr, rmarkdown, testthat

See at CRAN