Manipulation of Matched Phylogenies and Data using 'data.table'

An implementation that combines trait data and a phylogenetic tree (or trees) into a single object of class 'treedata.table'. The resulting object can be easily manipulated to simultaneously change the trait- and tree-level sampling. Currently implemented functions allow users to use a 'data.table' syntax when performing operations on the trait dataset within the 'treedata.table' object. For more details see Roman-Palacios et al. (2021) .


Reference manual

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install.packages("treedata.table")

0.1.1 by Cristian Roman-Palacios, a year ago


https://ropensci.github.io/treedata.table/, https://docs.ropensci.org/treedata.table/, https://github.com/ropensci/treedata.table/


Report a bug at https://github.com/ropensci/treedata.table/issues


Browse source code at https://github.com/cran/treedata.table


Authors: Josef Uyeda [aut] , Cristian Roman-Palacios [aut, cre] (ORCID: , April Wright [aut] , Luke Harmon [ctb] , Hugo Gruson [rev] , Kari Norman [rev]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports lazyeval, geiger, utils, data.table

Depends on ape

Suggests covr, knitr, rmarkdown, testthat, utf8


See at CRAN