High Throughput Phenotyping (HTP) Data Analysis

Phenotypic analysis of data coming from high throughput phenotyping (HTP) platforms, including different types of outlier detection, spatial analysis, and parameter estimation. The package is being developed within the EPPN2020 project (< https://eppn2020.plant-phenotyping.eu/>). Some functions have been created to be used in conjunction with the R package 'asreml' for the 'ASReml' software, which can be obtained upon purchase from 'VSN' international (< https://www.vsni.co.uk/software/asreml>).


Reference manual

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1.0.5 by Bart-Jan van Rossum, 3 months ago

https://biometris.github.io/statgenHTP/index.html, https://github.com/Biometris/statgenHTP/

Report a bug at https://github.com/Biometris/statgenHTP/issues

Browse source code at https://github.com/cran/statgenHTP

Authors: Emilie J Millet [aut] , Maria Xose Rodriguez Alvarez [aut] , Diana Marcela Perez Valencia [aut] , Isabelle Sanchez [aut] , Nadine Hilgert [aut] , Bart-Jan van Rossum [aut, cre] , Fred van Eeuwijk [aut] , Martin Boer [aut]

Documentation:   PDF Manual  

GPL license

Imports animation, factoextra, ggforce, ggplot2, ggnewscale, grid, gridExtra, locfit, lubridate, reshape2, scales, SpATS, splines

Suggests asreml, knitr, rmarkdown, tinytest

See at CRAN