Spatial Analysis of Vectra Immunoflourescent Data

Functions for visualizing and analyzing Vectra Immunofluorescent data. Options for calculating both the univariate and bivariate Ripley's K are included. Calculations are performed using a permutation-based approach. The permutation framework was proposed in Wilson et. al (2021) .


Reference manual

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1.0.0 by Fridley Lab, a month ago

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Authors: Jordan Creed [aut] , Ram Thapa [aut] , Christopher Wilson [aut] , Brooke Fridley [cph] , Fridley Lab [cre]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports magrittr, dplyr, tidyr, ggplot2, scales, stringr, ggdark, viridisLite, crayon, grDevices, Surrogate, purrr, janitor, rlang, modelr, plyr, tibble, spatstat.geom, spatstat.core, RColorBrewer, stats

Suggests knitr, rmarkdown, testthat

See at CRAN