Spatial Analysis of Vectra Immunoflourescent Data

Functions for visualizing and analyzing Vectra Immunofluorescent data. Options for calculating both the univariate and bivariate Ripley's K are included. Calculations are performed using a permutation-based approach. The permutation framework was proposed in Wilson et. al (2021) .


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install.packages("spatialTIME")

1.0.0 by Fridley Lab, a month ago


https://github.com/FridleyLab/spatialTIME


Report a bug at https://github.com/FridleyLab/spatialTIME/issues


Browse source code at https://github.com/cran/spatialTIME


Authors: Jordan Creed [aut] , Ram Thapa [aut] , Christopher Wilson [aut] , Brooke Fridley [cph] , Fridley Lab [cre]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports magrittr, dplyr, tidyr, ggplot2, scales, stringr, ggdark, viridisLite, crayon, grDevices, Surrogate, purrr, janitor, rlang, modelr, plyr, tibble, spatstat.geom, spatstat.core, RColorBrewer, stats

Suggests knitr, rmarkdown, testthat


See at CRAN