Ridge Redundancy Analysis for High-Dimensional Omics Data

Efficient framework for ridge redundancy analysis (rrda), tailored for high-dimensional omics datasets where the number of predictors exceeds the number of samples. The method leverages Singular Value Decomposition (SVD) to avoid direct inversion of the covariance matrix, enhancing scalability and performance. It also introduces a memory-efficient storage strategy for coefficient matrices, enabling practical use in large-scale applications. The package supports cross-validation for selecting regularization parameters and reduced-rank dimensions, making it a robust and flexible tool for multivariate analysis in omics research. Please refer to our article (Yoshioka et al., 2025) for more details.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("rrda")

0.2.3 by Julie Aubert, a year ago


Browse source code at https://github.com/cran/rrda


Authors: Hayato Yoshioka [aut] , Julie Aubert [aut, cre] (ORCID: , Tristan Mary-Huard [aut] (ORCID:


Documentation:   PDF Manual  


GPL (>= 3) license


Imports dplyr, furrr, ggplot2, grDevices, MASS, pheatmap, reshape2, RSpectra, scales, stats

Suggests testthat


See at CRAN