Dynamic Revision Letters for 'Rmarkdown' Manuscripts

Extracts tagged text from markdown manuscripts for inclusion in dynamically generated revision letters. Provides an R markdown template based on papaja::revision_letter_pdf() with comment cross-referencing, a system for managing multiple sections of extracted text, and a way to automatically determine the page number of quoted sections from PDF manuscripts.


revise

R-CMD-check

The goal of revise is to support authors in responding to revise and resubmit requests. These functions are designed to work with crsh/papaja.

Installation

You can install the development version of {revise} from GitHub with:

# install.packages("remotes")
remotes::install_github("conig/revise")

Starting a revision document

ReviewerComment addin

We have included an addin so you can mark text as a reviewer comment. If a YAML header is not detected in document the addin will add it. Fields will automatically be filled in if there is a .rmd file in the working directory. Additionally, selected text will be marked as a reviewer comment by including it within an “asis” chunk. Text below this chunk will be tagged as an author response. A hotkey can be set for this addin (e.g. Ctrl+Shift+R).

animation of ReviewerComment addin animation of ReviewerComment addin

Loading a manuscript

You can use rmd or docx files with revise. To load either, simply call revise::read_manuscript(“your_file.rmd”)

For example. Here is an example docx where content has been tagged with comment boxes. E.g, Revise::hard

docx_path <- system.file("examples/word_test.docx", package = "revise")

man <- read_manuscript(docx_path)
man
#> <Manuscript>
#> [34m- 6 sections[39m
#> [31mNo PDF attached[39m

We can see all tagged sections by running

names(man$sections)
#> [1] "track_changes" "section"       "multi_lines"   "bullets"       "hard"          "numbered"

Then we can retrieve using a section name

revision <- get_revision("hard", man)
revision
#> [1] ">Hard example\n>\n>This section has all features:\n>\n>* Bullet1\n>\n>* Bullet2\n>\n>* Bullet3\n>\n>Some more text is here."

This content can then be put directly into a response document using single backticks.

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("revise")

0.1.0 by James Conigrave, 2 years ago


https://github.com/conig/revise


Report a bug at https://github.com/conig/revise/issues


Browse source code at https://github.com/cran/revise


Authors: James Conigrave [aut, cre] , Philip Parker [aut] , Taren Sanders [aut] , Michael Noetel [aut] , Caspar J. Van Lissa [aut]


Documentation:   PDF Manual  


MIT + file LICENCE license


Imports bookdown, dplyr, glue, knitr, papaja, rmarkdown, rstudioapi, stringr, pdftools, officer, xml2, worcs, cli

Suggests googledrive, docxtractr, testthat

System requirements: pandoc (>= 1.14) - http://pandoc.org


See at CRAN