Interpolate Bathymetry and Quantify Physical Aquatic Habitat

Offers bathymetric interpolation using Inverse Distance Weighted and Ordinary Kriging via the 'gstat' and 'terra' packages. Other functions focus on quantifying physical aquatic habitats (e.g., littoral, epliminion, metalimnion, hypolimnion) from interpolated digital elevation models (DEMs). Functions were designed to calculate these metrics across water levels for use in reservoirs but can be applied to any DEM and will provide values for fixed conditions. Parameters like Secchi disk depth or estimated photic zone, thermocline depth, and water level fluctuation depth are included in most functions.


rLakeHabitat

This package offers bathymetric interpolation using Inverse Distance Weighted and Ordinary Kriging via the gstat and terra packages. Other functions focus on quantifying physical aquatic habitats (e.g., littoral, epliminion, metalimnion, hypolimnion) from interpolated DEMs. Functions were designed to calculate these metrics across water levels for use in reservoirs but can be applied to any DEM and will provide values for fixed conditions. Parameters like Secchi disk depth or estimated photic zone, thermocline depth, and water level fluctuation depth are included in most functions.

To install and load 'rLakeHabitat' in R, run the following (requires the devtools package):

devtools::install_gitlab("tristanblechinger/rlakehabitat")

require(rLakeHabitat)

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("rLakeHabitat")

1.0.3 by Tristan Blechinger, 3 months ago


https://gitlab.com/tristanblechinger/rlakehabitat


Report a bug at https://gitlab.com/tristanblechinger/rlakehabitat/-/issues


Browse source code at https://github.com/cran/rLakeHabitat


Authors: Tristan Blechinger [aut, cre] (ORCID: , Sean Bertalot [aut]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports dplyr, terra, gstat, sf, ggplot2, gganimate, tidyterra, rLakeAnalyzer, isoband

Suggests testthat, knitr, rmarkdown, spbal, ggspatial, httr, maptiles, mapview, tidyr


See at CRAN