Visually Assessing the Specificity and Informativeness of Primer Pairs

Identifies potential target sequences for a given set of primers and generates phylogenetic trees annotated with the taxonomies of the predicted amplification products.


Reference manual

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1.0.5 by Jim Hester, a year ago

Browse source code at

Authors: Jim Hester

Documentation:   PDF Manual  

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GPL-2 license

Imports ggplot2, grid, XML, ape, httr, lubridate, plyr, scales, stringr, foreach, reshape2, RCurl

Depends on directlabels, gridExtra

See at CRAN