Phylogenetic Tools for Eco-Phylogenetics

A collection of tools for building RAxML supermatrix using PHYLIP or aligned FASTA files. These functions will be useful for building large phylogenies using multiple markers.


phylotools is an R package, to install it, please use the following command in R:

library(devtools)

install_github("helixcn/phylotools")

If you haven't had devtools installed, please install it by typing "install.packages("devtools")" in R console.

Please feel free to send an email to the package maintainer Dr. Jinlong Zhang if you have any question or comments about this package.

News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("phylotools")

0.2.2 by Jinlong Zhang, 3 years ago


https://github.com/helixcn/phylotools


Browse source code at https://github.com/cran/phylotools


Authors: Jinlong Zhang [aut, cre] , Nancai Pei [ctb] , Xiangcheng Mi [ctb]


Documentation:   PDF Manual  


Task views: Phylogenetics, Especially Comparative Methods


GPL-2 license


Depends on ape

Suggests vegan


See at CRAN